diff options
| -rw-r--r-- | NAMESPACE | 3 | ||||
| -rw-r--r-- | R/WP_known.R | 2 | ||||
| -rw-r--r-- | R/WP_unknown.R | 2 | ||||
| -rw-r--r-- | R/computeLL.R | 2 | ||||
| -rw-r--r-- | man/WP_known.Rd | 1 | ||||
| -rw-r--r-- | man/WP_unknown.Rd | 1 | ||||
| -rw-r--r-- | man/computeLL.Rd | 1 |
7 files changed, 6 insertions, 6 deletions
@@ -3,7 +3,4 @@ export(ID) export(IDEA) export(WP) -export(WP_known) -export(WP_unknown) -export(computeLL) export(seqB) diff --git a/R/WP_known.R b/R/WP_known.R index 2c54bce..4c43ed2 100644 --- a/R/WP_known.R +++ b/R/WP_known.R @@ -8,7 +8,7 @@ #' #' @return The function returns the maximum likelihood estimator of R0. #' -#' @export +#' @keywords internal WP_known <- function(NT, p) { k <- length(p) TT <- length(NT) - 1 diff --git a/R/WP_unknown.R b/R/WP_unknown.R index ee950b1..832a3ba 100644 --- a/R/WP_unknown.R +++ b/R/WP_unknown.R @@ -20,7 +20,7 @@ #' \code{J0} (the location for the maximum likelihood estimator \code{Rhat}). If \code{JJ} and \code{J0} #' are not the same, this means that the maximum likelihood estimator is not unique. #' -#' @export +#' @keywords internal WP_unknown <- function(NT, B=100, shape.max=10, scale.max=10, tol=0.999) { shape <- seq(0, shape.max, length.out=B+1) scale <- seq(0, scale.max, length.out=B+1) diff --git a/R/computeLL.R b/R/computeLL.R index 9047777..01c0d57 100644 --- a/R/computeLL.R +++ b/R/computeLL.R @@ -8,7 +8,7 @@ #' #' @return This function returns the log-likelihood at the input variables and parameters. #' -#' @export +#' @keywords internal computeLL <- function(p, NT, R0) { k <- length(p) TT <- length(NT) - 1 diff --git a/man/WP_known.Rd b/man/WP_known.Rd index dd113ac..aa6ab84 100644 --- a/man/WP_known.Rd +++ b/man/WP_known.Rd @@ -18,3 +18,4 @@ The function returns the maximum likelihood estimator of R0. This is a background/internal function called by \code{WP}. It computes the maximum likelihood estimator of R0 assuming that the serial distribution is known and finite discrete. } +\keyword{internal} diff --git a/man/WP_unknown.Rd b/man/WP_unknown.Rd index f625019..02a3280 100644 --- a/man/WP_unknown.Rd +++ b/man/WP_unknown.Rd @@ -33,3 +33,4 @@ of R0 assuming that the serial distribution is unknown but comes from a discreti The function then implements a simple grid search algorithm to obtain the maximum likelihood estimator of R0 as well as the gamma parameters. } +\keyword{internal} diff --git a/man/computeLL.Rd b/man/computeLL.Rd index 241d1ad..7e9926a 100644 --- a/man/computeLL.Rd +++ b/man/computeLL.Rd @@ -19,3 +19,4 @@ This function returns the log-likelihood at the input variables and parameters. \description{ This is a background/internal function called by \code{WP}. It computes the log-likelihood. } +\keyword{internal} |