Update package citation and description

diff --git a/CITATION.cff b/CITATION.cff
index c1edd196c9456cefcc310a1ffabe81089f81fea4..2536fab65b11299ff0b4e8115a74eb6fa98a1693 100644 (file)
--- a/CITATION.cff
+++ b/CITATION.cff
@@ -2,42 +2,21 @@ cff-version: 1.2.0
 message: 'To cite package "Rnaught" in publications use:'
 type: software
 license: AGPL-3.0-or-later
 message: 'To cite package "Rnaught" in publications use:'
 type: software
 license: AGPL-3.0-or-later

-title: 'Rnaught: Estimate the Basic Reproduction Number of Infectious Diseases'
-version: 0.1.0
-doi: 10.1371/journal.pone.0269306
-abstract: A collection of methods for estimating the basic reproduction number (R0)
-  of infectious diseases. Optionally available as a web application using the 'shiny'
-  framework.
+title: 'Rnaught: Estimate the Basic Reproduction Number (R0) of Infectious Diseases'
+abstract: An R package and web application for estimating the basic reproduction
+  number (R0) of infectious diseases.

 authors:
 authors:

+- family-names: Model
+  given-names: Naeem
+  email: me@nmode.ca

 - family-names: Boonpatcharanon
   given-names: Sawitree
 - family-names: Heffernan
   given-names: Jane
 - family-names: Jankowski
   given-names: Hanna
 - family-names: Boonpatcharanon
   given-names: Sawitree
 - family-names: Heffernan
   given-names: Jane
 - family-names: Jankowski
   given-names: Hanna

-- family-names: Model
-  given-names: Naeem
-  email: me@nmode.ca
-preferred-citation:
-  type: article
-  title: Estimating the basic reproduction number at the beginning of an outbreak
-  authors:
-  - family-names: Boonpatcharanon
-    given-names: Sawitree
-  - family-names: Heffernan
-    given-names: Jane M.
-  - family-names: Jankowski
-    given-names: Hanna
-  doi: 10.1371/journal.pone.0269306
-  journal: PLOS ONE
-  publisher:
-    name: Public Library of Science
-  year: '2022'
-  month: '6'
-  volume: '17'
-  issue: '6'
-  start: 1-24
-repository-code: https://github.com/MI2YorkU/Rnaught
+repository-code: 'https://github.com/MI2YorkU/Rnaught'
+url: 'https://MI2YorkU.github.io/Rnaught'

 contact:
 - family-names: Model
   given-names: Naeem
 contact:
 - family-names: Model
   given-names: Naeem

diff --git a/DESCRIPTION b/DESCRIPTION
index 80b5a279f9482b574ca8cf5eb93a85810e37b7b8..254fe46bb9c4d781df0558d1a0ce364660dce622 100644 (file)
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,15 +1,15 @@
 Package: Rnaught
 Type: Package
 Package: Rnaught
 Type: Package

-Title: Estimate the Basic Reproduction Number of Infectious Diseases
+Title: Estimate the Basic Reproduction Number (R0) of Infectious Diseases

 Version: 0.1.0
 Authors@R: c(
 Version: 0.1.0
 Authors@R: c(

+    person("Naeem", "Model", role=c("aut", "cre"), email="me@nmode.ca"),

     person("Sawitree", "Boonpatcharanon", role="aut"),
     person("Jane", "Heffernan", role="aut"),
     person("Hanna", "Jankowski", role="aut"),
     person("Sawitree", "Boonpatcharanon", role="aut"),
     person("Jane", "Heffernan", role="aut"),
     person("Hanna", "Jankowski", role="aut"),

-    person("Naeem", "Model", role=c("aut", "cre"), email="me@nmode.ca"))
-Description: A collection of methods for estimating the basic reproduction
-    number (R0) of infectious diseases. Optionally available as a web
-    application using the 'shiny' framework.
+    person("Tatiana", "Krikella", role="ctb"))
+Description: An R package and web application for estimating the basic
+    reproduction number (R0) of infectious diseases.

 License: AGPL (>= 3)
 URL: https://MI2YorkU.github.io/Rnaught, https://github.com/MI2YorkU/Rnaught
 BugReports: https://github.com/MI2YorkU/Rnaught/issues
 License: AGPL (>= 3)
 URL: https://MI2YorkU.github.io/Rnaught, https://github.com/MI2YorkU/Rnaught
 BugReports: https://github.com/MI2YorkU/Rnaught/issues


@@ -19,8 +19,8 @@ Imports:
 Suggests: 
     knitr,
     rmarkdown,
 Suggests: 
     knitr,
     rmarkdown,

-    bslib,

     shiny,
     shiny,

+    bslib,

     DT,
     plotly
 Encoding: UTF-8
     DT,
     plotly
 Encoding: UTF-8