Update Shiny appHEADmaster

- Remove template/logic for single data entry
- Change 'Add estimators' to 'About estimators'; adding estimators and viewing estimates are now done in the same tab
- Swap rows and columns in estimates table (estimators as row names, datasets as column names)
- Add a separate column for the serial interval to the estimates table
- Add plots for daily and weekly data using the Plotly library
- Remove italics from the subscript in all occurences of 'R_0'
- Fix code/text formatting

1 files changed, 22 insertions, 0 deletions

diff --git a/inst/app/templates/content/estimation/estimates/add-estimators/mu.html b/inst/app/templates/content/estimation/estimates/add-estimators/mu.html
new file mode 100644
index 0000000..8781574
--- /dev/null
+++ b/inst/app/templates/content/estimation/estimates/add-estimators/mu.html
@@ -0,0 +1,22 @@
+<!-- Serial interval label and help tooltip. -->
+<label class="form-label" for="mu_{{ id }}">
+  Serial interval
+  <sup data-bs-toggle="tooltip" data-bs-placement="right"
+       data-bs-title="The serial interval is the time between when an infected individual (the infector) becomes
+                      symptomatic, to when another individual (who is infected by the infector) becomes symptomatic.">
+    [?]
+  </sup>
+</label>
+<div class="input-group">
+  <!-- Serial interval input field. -->
+  <input name="mu_{{ id }}" class="form-control" type="text">
+  <!-- Days/weeks dropdown. -->
+  <select name="mu_{{ id }}_units" class="form-select">
+    <option value="Days" selected>Days</option>
+    <option value="Weeks">Weeks</option>
+  </select>
+</div>
+<!-- Warning text for incorrect values. -->
+<div>
+  <small id="mu_{{ id }}_warn" class="form-text text-primary shiny-text-output"></small>
+</div>