diff options
| author | Naeem Model <me@nmode.ca> | 2024-06-09 16:01:51 +0000 |
|---|---|---|
| committer | Naeem Model <me@nmode.ca> | 2024-06-09 16:01:51 +0000 |
| commit | 9fd931aeeba4ab7bdede1a625f64e7024c2b55aa (patch) | |
| tree | b59967df497f898e9b8f7e1cd0e345ed0ff71e36 /inst/app/templates/content/estimation/about-estimators | |
| parent | 887c57c423ca8318d482a9f85514b3d6f281a696 (diff) | |
- Remove template/logic for single data entry
- Change 'Add estimators' to 'About estimators'; adding estimators and viewing estimates are now done in the same tab
- Swap rows and columns in estimates table (estimators as row names, datasets as column names)
- Add a separate column for the serial interval to the estimates table
- Add plots for daily and weekly data using the Plotly library
- Remove italics from the subscript in all occurences of 'R_0'
- Fix code/text formatting
Diffstat (limited to 'inst/app/templates/content/estimation/about-estimators')
5 files changed, 22 insertions, 0 deletions
diff --git a/inst/app/templates/content/estimation/about-estimators/id.html b/inst/app/templates/content/estimation/about-estimators/id.html new file mode 100644 index 0000000..3200c00 --- /dev/null +++ b/inst/app/templates/content/estimation/about-estimators/id.html @@ -0,0 +1,5 @@ +The incidence decay (ID) estimator assumes an exponential model and finds the parameters by minimizing the sum of the +squared differences between the observed cases counts and the case counts expected based on the assumed model. +The method assumes that the serial interval is known. This means that the user needs to input the value of the serial +interval. The serial interval is the average time between the first infection and the time the first infected individual +exhibits disease symptoms. diff --git a/inst/app/templates/content/estimation/about-estimators/idea.html b/inst/app/templates/content/estimation/about-estimators/idea.html new file mode 100644 index 0000000..edfbb79 --- /dev/null +++ b/inst/app/templates/content/estimation/about-estimators/idea.html @@ -0,0 +1 @@ +This is a short description of the IDEA method. diff --git a/inst/app/templates/content/estimation/about-estimators/panel.html b/inst/app/templates/content/estimation/about-estimators/panel.html new file mode 100644 index 0000000..98fe155 --- /dev/null +++ b/inst/app/templates/content/estimation/about-estimators/panel.html @@ -0,0 +1,14 @@ +<div class="accordion-item"> + <h2 class="accordion-header"> + <button class="accordion-button collapsed" type="button" + data-bs-toggle="collapse" data-bs-target="#{{ id }}"> + <h4>{{ header }}</h4> + </button> + </h2> + <div id="{{ id }}" class="accordion-collapse collapse" data-bs-parent="#estimators-accordion"> + <div class="accordion-body"> + <p>Reference: <a href="{{ reference_url }}" target="_blank"><em>{{ reference_label }}</em></a></p> + <p>{{ htmlTemplate(paste0("templates/content/estimation/about-estimators/", id, ".html")) }}</p> + </div> + </div> +</div> diff --git a/inst/app/templates/content/estimation/about-estimators/seq_bayes.html b/inst/app/templates/content/estimation/about-estimators/seq_bayes.html new file mode 100644 index 0000000..f6df3ee --- /dev/null +++ b/inst/app/templates/content/estimation/about-estimators/seq_bayes.html @@ -0,0 +1 @@ +This is a short description of the seqB method. diff --git a/inst/app/templates/content/estimation/about-estimators/wp.html b/inst/app/templates/content/estimation/about-estimators/wp.html new file mode 100644 index 0000000..640b44d --- /dev/null +++ b/inst/app/templates/content/estimation/about-estimators/wp.html @@ -0,0 +1 @@ +This is a short description of the WP method. |