Update Shiny app

- Remove template/logic for single data entry
- Change 'Add estimators' to 'About estimators'; adding estimators and viewing estimates are now done in the same tab
- Swap rows and columns in estimates table (estimators as row names, datasets as column names)
- Add a separate column for the serial interval to the estimates table
- Add plots for daily and weekly data using the Plotly library
- Remove italics from the subscript in all occurences of 'R_0'
- Fix code/text formatting

2 files changed, 25 insertions, 0 deletions

diff --git a/inst/app/templates/content/data/view-data/data-plots.html b/inst/app/templates/content/data/view-data/data-plots.html
new file mode 100644
index 0000000..5019088
--- /dev/null
+++ b/inst/app/templates/content/data/view-data/data-plots.html
@@ -0,0 +1,7 @@
+<h4>Data plots</h4>
+<div class="container my-5">
+  {{ plotly::plotlyOutput(outputId = "data_plot_days") }}
+</div>
+<div class="container">
+  {{ plotly::plotlyOutput(outputId = "data_plot_weeks") }}
+</div>
diff --git a/inst/app/templates/content/data/view-data/data-table.html b/inst/app/templates/content/data/view-data/data-table.html
new file mode 100644
index 0000000..590a5b9
--- /dev/null
+++ b/inst/app/templates/content/data/view-data/data-table.html
@@ -0,0 +1,18 @@
+<h4>Data table</h4>
+<div class="my-3">
+  {{ DT::dataTableOutput(outputId = "data_table") }}
+</div>
+<!-- Display inactive delete button when no rows are selected. -->
+<button type="button" class="btn btn-primary btn-sm text-white" disabled
+        data-display-if="'data_table_rows_selected' in input && input.data_table_rows_selected.length == 0">
+  <span class="glyphicon glyphicon-remove"></span> Delete row(s)
+</button>
+<!-- Display active delete button when at least one row is selected. -->
+<button id="data_delete" type="button" class="btn btn-primary btn-sm action-button text-white"
+        data-display-if="'data_table_rows_selected' in input && input.data_table_rows_selected.length != 0">
+  <span class="glyphicon glyphicon-remove"></span> Delete row(s)
+</button>
+<!-- Button to export data table as a CSV file. -->
+<a id="data_export" type="button" class="btn btn-outline-primary btn-sm shiny-download-link">
+  <span class="glyphicon glyphicon-download-alt"></span> Export table
+</a>