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authorNaeem Model <me@nmode.ca>2023-06-21 06:17:43 +0000
committerNaeem Model <me@nmode.ca>2023-06-21 06:17:43 +0000
commit9d7b542a1eb1eead875ad7f939936e4d8ac83145 (patch)
tree0412b0f36951698aadaa82ef632035397aafdc89 /R/WP.R
parent9c1a5668803e735f034700c55028ffc0146f1e93 (diff)
Remove input args from output lists
Diffstat (limited to 'R/WP.R')
-rw-r--r--R/WP.R10
1 files changed, 5 insertions, 5 deletions
diff --git a/R/WP.R b/R/WP.R
index 9e44bf9..8d528d5 100644
--- a/R/WP.R
+++ b/R/WP.R
@@ -68,14 +68,14 @@
#' res3 <- WP(NT=NT)
#' res3$Rhat
#' ## find mean of estimated serial distribution
-#' serial <- res3$SD
-#' sum(serial$supp*serial$pmf)
+#' serial <- res3$SD
+#' sum(serial$supp * serial$pmf)
#'
#' ## ========================================================= ##
#' ## Compute Rhat using only the first five weeks of data ##
#' ## ========================================================= ##
#'
-#' res4 <- WP(NT=NT[1:5], mu=5/7, method="known") # serial distribution has mean of five days
+#' res4 <- WP(NT=NT[1:5], mu=5/7, method="known") # serial distribution has mean of five days
#' res4$Rhat
#'
#' @export
@@ -99,10 +99,10 @@ WP <- function(NT, mu="NA", method="unknown", search=list(B=100, shape.max=10, s
p <- diff(pexp(0:range.max, 1/mu))
p <- p / sum(p)
res <- WP_known(NT=NT, p=p)
- Rhat <- res$Rhat
+ Rhat <- res
JJ <- NA
}
}
- return(list(Rhat=Rhat, check=length(JJ), SD=list(supp=1:range.max, pmf=p), inputs=list(NT=NT, mu=mu, method=method, search=search, tol=tol)))
+ return(list(Rhat=Rhat, check=length(JJ), SD=list(supp=1:range.max, pmf=p)))
}