#' WP method background function WP_known #' #' This is a background/internal function called by \code{WP}. It computes the maximum likelihood estimator of R0 assuming that the serial distribution is known and finite discrete. #' #' @param NT vector of case counts #' @param p discretized version of the serial distribution #' @return The function returns \code{Rhat}, the maximum likelihood estimator of R0. #' @export # WP_known <- function(NT, p){ k <- length(p) TT <- length(NT)-1 mu_t <- rep(0, TT) for(i in 1:TT){ Nt <- NT[i:max(1,i-k+1)] # print(Nt) # print(p[1:min(k,i)]) mu_t[i] <- sum(p[1:min(k,i)]*Nt) } Rhat <- sum(NT[-1])/sum(mu_t) return(list(Rhat=Rhat)) }