White and Pagano: Utilizing the Serial Distribution â¢ Rnaught

X-Git-Url: https://git.nmode.ca/Rnaught/blobdiff_plain/e09713dddea0d8b366d0d75b6eb7f92aa6b0836c..bb7c63ab3e54f76cba4dc4a9b4e9daf3e8475bcf:/articles/wp_serial.html diff --git a/articles/wp_serial.html b/articles/wp_serial.html index 8686332..5a2b0e9 100644 --- a/articles/wp_serial.html +++ b/articles/wp_serial.html @@ -6,10 +6,15 @@ White and Pagano: Utilizing the Serial Distribution â¢ Rnaught + + + + + - - + + @@ -29,6 +34,7 @@

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Reference
@@ -70,16 +76,16 @@ symptomatic, to when another individual who is infected by the infector becomes symptomatic. The serial interval refers to a range of likely values from this distribution, although it is typically reported as the mean.
-
In the White and Pagano method, the serial distribution is assumed to -be a discretized, finite version of a gamma distribution. Setting the -parameter serial to TRUE causes this -discretized distribution to be returned in addition to the estimate of -R0. Furthermore, the method can be used whether or not the serial -interval (specified as the parameter mu) is known. When -mu is specified, it is taken to be the mean of a continuous -gamma distribution (i.e., before the discretization). As such, the mean -computed from the returned serial distribution may differ slightly from -mu:
+
In the White and Pagano method, wp(), the serial +distribution is assumed to be a discretized, finite version of a gamma +distribution. Setting the parameter serial to +TRUE causes this discretized distribution to be returned in +addition to the estimate of R0. Furthermore, the method can be used +whether or not the serial interval (specified as the parameter +mu) is known. When mu is specified, it is +taken to be the mean of a continuous gamma distribution (i.e., before +the discretization). As such, the mean computed from the returned serial +distribution may differ slightly from mu:
```
 # Case counts.
 cases <- c(1, 4, 10, 5, 3, 4, 19, 3, 3, 14, 4)
@@ -124,11 +130,11 @@ estimates of the serial interval:
 
 
     
-  Developed by Sawitree Boonpatcharanon, Jane Heffernan, Hanna Jankowski, Naeem Model.
+  Developed by Naeem Model, Sawitree Boonpatcharanon, Jane Heffernan, Hanna Jankowski.
 
 
 
-  Site built with pkgdown 2.1.1.
+  Site built with pkgdown 2.1.3.
 
 
     
```